Blog

Yuwei BaoSeptember 24, 2022

Tricks make life easier

Bioinformatics

Notes

I. Single nucleotide variants and short insertions/deletions (SNVs and INDELs)

GATK

From fastqs to bam

Filter bam

Other

II. Structural variants (SV)

Tools

III. Copy number variation (CNV)

Tools

Other data type

Long-read DNA

16s RNA

Protein

Transposable elements (TEs)

Toolbox

Programming

Linux

Python

Java

Format

Tools

Statistics

Theory

Tools

Learning interests

Tulane footprint